Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.37□□□□□ -0.11
Nup43P59235 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nup43P59235 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nup43P59235 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup43P59235 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nup43P59235 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Nup43P59235 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nup43P59235 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup43P59235 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nup43P59235 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nup43P59235 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.36□□□□□ -0.11
Nup43P59235 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup43P59235 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup43P59235 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.35□□□□□ -0.11
Nup43P59235 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nup43P59235 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nup43P59235 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.35□□□□□ -0.11
Nup43P59235 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.35□□□□□ -0.11
Nup43P59235 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Psmb5-202ENSMUST00000227257 622 ntBASIC14.35□□□□□ -0.11
Nup43P59235 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.35□□□□□ -0.11
Nup43P59235 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nup43P59235 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.35□□□□□ -0.11
Nup43P59235 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nup43P59235 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup43P59235 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.34□□□□□ -0.11
Nup43P59235 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup43P59235 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Gm14140-201ENSMUST00000119999 995 ntBASIC14.34□□□□□ -0.11
Nup43P59235 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Gm27300-201ENSMUST00000184085 97 ntBASIC14.34□□□□□ -0.11
Nup43P59235 Gm27335-201ENSMUST00000184758 97 ntBASIC14.34□□□□□ -0.11
Nup43P59235 Gm18206-201ENSMUST00000207027 926 ntBASIC14.34□□□□□ -0.11
Nup43P59235 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms