Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.37■□□□□ 0.21
Nub1P54729 Gm18733-201ENSMUST00000173950 856 ntBASIC16.37■□□□□ 0.21
Nub1P54729 Gm27628-201ENSMUST00000184911 107 ntBASIC16.37■□□□□ 0.21
Nub1P54729 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.37■□□□□ 0.21
Nub1P54729 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.37■□□□□ 0.21
Nub1P54729 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nub1P54729 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nub1P54729 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.37■□□□□ 0.21
Nub1P54729 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nub1P54729 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.37■□□□□ 0.21
Nub1P54729 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Nub1P54729 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.36■□□□□ 0.21
Nub1P54729 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nub1P54729 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.36■□□□□ 0.21
Nub1P54729 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.36■□□□□ 0.21
Nub1P54729 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.36■□□□□ 0.21
Nub1P54729 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.36■□□□□ 0.21
Nub1P54729 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.36■□□□□ 0.21
Nub1P54729 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nub1P54729 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nub1P54729 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.35■□□□□ 0.21
Nub1P54729 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.35■□□□□ 0.21
Nub1P54729 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nub1P54729 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.35■□□□□ 0.21
Nub1P54729 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.35■□□□□ 0.21
Nub1P54729 Gm4899-201ENSMUST00000178708 719 ntBASIC16.35■□□□□ 0.21
Nub1P54729 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.35■□□□□ 0.21
Nub1P54729 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Nub1P54729 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.35■□□□□ 0.21
Nub1P54729 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nub1P54729 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nub1P54729 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Nub1P54729 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nub1P54729 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nub1P54729 BC037039-201ENSMUST00000192003 2205 ntBASIC16.34■□□□□ 0.21
Nub1P54729 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.34■□□□□ 0.21
Nub1P54729 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nub1P54729 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nub1P54729 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.34■□□□□ 0.21
Nub1P54729 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.34■□□□□ 0.21
Nub1P54729 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nub1P54729 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nub1P54729 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nub1P54729 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nub1P54729 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nub1P54729 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nub1P54729 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Nub1P54729 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nub1P54729 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.33■□□□□ 0.2
Nub1P54729 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms