Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.69■□□□□ 0.1
Msh2P43247 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Msh2P43247 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Gm12644-201ENSMUST00000119935 606 ntBASIC15.69■□□□□ 0.1
Msh2P43247 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.69■□□□□ 0.1
Msh2P43247 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.69■□□□□ 0.1
Msh2P43247 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.69■□□□□ 0.1
Msh2P43247 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.69■□□□□ 0.1
Msh2P43247 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh2P43247 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Msh2P43247 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Msh2P43247 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh2P43247 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.69■□□□□ 0.1
Msh2P43247 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Msh2P43247 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Gm25406-201ENSMUST00000157599 105 ntBASIC15.68■□□□□ 0.1
Msh2P43247 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.68■□□□□ 0.1
Msh2P43247 Gm25745-201ENSMUST00000174945 133 ntBASIC15.68■□□□□ 0.1
Msh2P43247 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Msh2P43247 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.68■□□□□ 0.1
Msh2P43247 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Msh2P43247 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.68■□□□□ 0.1
Msh2P43247 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh2P43247 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.67■□□□□ 0.1
Msh2P43247 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Msh2P43247 Gm6257-201ENSMUST00000163864 910 ntBASIC15.67■□□□□ 0.1
Msh2P43247 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Gm34391-201ENSMUST00000203706 907 ntBASIC15.67■□□□□ 0.1
Msh2P43247 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.67■□□□□ 0.1
Msh2P43247 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Msh2P43247 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Msh2P43247 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Msh2P43247 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Msh2P43247 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh2P43247 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Msh2P43247 Gm24589-201ENSMUST00000116692 94 ntBASIC15.66■□□□□ 0.1
Msh2P43247 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms