Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.13□□□□□ -0.31
Slc6a1P31648 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc6a1P31648 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.13□□□□□ -0.31
Slc6a1P31648 Gm21559-201ENSMUST00000220638 855 ntBASIC13.13□□□□□ -0.31
Slc6a1P31648 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Gm8587-201ENSMUST00000076538 843 ntBASIC13.13□□□□□ -0.31
Slc6a1P31648 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.13□□□□□ -0.31
Slc6a1P31648 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc6a1P31648 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Slc6a1P31648 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.12□□□□□ -0.31
Slc6a1P31648 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.12□□□□□ -0.31
Slc6a1P31648 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.12□□□□□ -0.31
Slc6a1P31648 Gm33142-201ENSMUST00000193913 867 ntBASIC13.12□□□□□ -0.31
Slc6a1P31648 Gm7213-201ENSMUST00000215977 950 ntBASIC13.12□□□□□ -0.31
Slc6a1P31648 Gm7370-201ENSMUST00000219471 767 ntBASIC13.12□□□□□ -0.31
Slc6a1P31648 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slc6a1P31648 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a1P31648 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.11□□□□□ -0.31
Slc6a1P31648 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Gm23547-201ENSMUST00000158210 271 ntBASIC13.11□□□□□ -0.31
Slc6a1P31648 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Gm21362-201ENSMUST00000194272 928 ntBASIC13.11□□□□□ -0.31
Slc6a1P31648 Gm44450-201ENSMUST00000199528 114 ntBASIC13.11□□□□□ -0.31
Slc6a1P31648 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Gm18421-201ENSMUST00000204122 625 ntBASIC13.11□□□□□ -0.31
Slc6a1P31648 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Slc6a1P31648 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.11□□□□□ -0.31
Slc6a1P31648 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a1P31648 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.11□□□□□ -0.31
Slc6a1P31648 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Slc6a1P31648 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a1P31648 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms