Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Cd40lgP27548 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cd40lgP27548 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.03□□□□□ -0.16
Cd40lgP27548 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cd40lgP27548 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.03□□□□□ -0.16
Cd40lgP27548 Gm6550-201ENSMUST00000187574 993 ntBASIC14.03□□□□□ -0.16
Cd40lgP27548 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.03□□□□□ -0.16
Cd40lgP27548 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.03□□□□□ -0.16
Cd40lgP27548 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.03□□□□□ -0.16
Cd40lgP27548 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.03□□□□□ -0.16
Cd40lgP27548 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.03□□□□□ -0.16
Cd40lgP27548 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.03□□□□□ -0.16
Cd40lgP27548 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40lgP27548 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.02□□□□□ -0.16
Cd40lgP27548 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40lgP27548 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Cd40lgP27548 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40lgP27548 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40lgP27548 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40lgP27548 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40lgP27548 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Cd40lgP27548 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40lgP27548 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cd40lgP27548 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cd40lgP27548 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.01□□□□□ -0.17
Cd40lgP27548 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.01□□□□□ -0.17
Cd40lgP27548 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.01□□□□□ -0.17
Cd40lgP27548 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms