Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Gm14722-201ENSMUST00000118943 689 ntBASIC14.19□□□□□ -0.14
Clk1P22518 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk1P22518 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.19□□□□□ -0.14
Clk1P22518 Gm7506-201ENSMUST00000207758 815 ntBASIC14.19□□□□□ -0.14
Clk1P22518 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clk1P22518 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk1P22518 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk1P22518 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk1P22518 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk1P22518 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk1P22518 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk1P22518 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk1P22518 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk1P22518 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk1P22518 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.18□□□□□ -0.14
Clk1P22518 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.18□□□□□ -0.14
Clk1P22518 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk1P22518 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk1P22518 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk1P22518 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk1P22518 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk1P22518 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk1P22518 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Clk1P22518 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.17□□□□□ -0.14
Clk1P22518 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Clk1P22518 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.17□□□□□ -0.14
Clk1P22518 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clk1P22518 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Clk1P22518 Gm27459-201ENSMUST00000184860 107 ntBASIC14.17□□□□□ -0.14
Clk1P22518 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
Clk1P22518 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Clk1P22518 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clk1P22518 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk1P22518 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.16□□□□□ -0.14
Clk1P22518 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Clk1P22518 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clk1P22518 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.16□□□□□ -0.14
Clk1P22518 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clk1P22518 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.16□□□□□ -0.14
Clk1P22518 Gm25927-201ENSMUST00000175058 117 ntBASIC14.16□□□□□ -0.14
Clk1P22518 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.16□□□□□ -0.14
Clk1P22518 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.16□□□□□ -0.14
Clk1P22518 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.16□□□□□ -0.14
Clk1P22518 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.16□□□□□ -0.14
Clk1P22518 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms