Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.42□□□□□ -0.1
Lire1P11260 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lire1P11260 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lire1P11260 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.42□□□□□ -0.1
Lire1P11260 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lire1P11260 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.42□□□□□ -0.1
Lire1P11260 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.42□□□□□ -0.1
Lire1P11260 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lire1P11260 Gm2651-201ENSMUST00000203560 838 ntBASIC14.42□□□□□ -0.1
Lire1P11260 Gm18421-201ENSMUST00000204122 625 ntBASIC14.42□□□□□ -0.1
Lire1P11260 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lire1P11260 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.42□□□□□ -0.1
Lire1P11260 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lire1P11260 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lire1P11260 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lire1P11260 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lire1P11260 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lire1P11260 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lire1P11260 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lire1P11260 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lire1P11260 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lire1P11260 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.41□□□□□ -0.1
Lire1P11260 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.41□□□□□ -0.1
Lire1P11260 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Lire1P11260 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lire1P11260 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lire1P11260 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.41□□□□□ -0.1
Lire1P11260 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.41□□□□□ -0.1
Lire1P11260 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.41□□□□□ -0.1
Lire1P11260 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Lire1P11260 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lire1P11260 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.41□□□□□ -0.1
Lire1P11260 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Lire1P11260 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Lire1P11260 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lire1P11260 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.4□□□□□ -0.1
Lire1P11260 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.4□□□□□ -0.1
Lire1P11260 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Lire1P11260 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.4□□□□□ -0.1
Lire1P11260 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lire1P11260 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Gm7862-201ENSMUST00000121461 292 ntBASIC14.4□□□□□ -0.1
Lire1P11260 Gm25925-201ENSMUST00000158314 306 ntBASIC14.4□□□□□ -0.1
Lire1P11260 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.4□□□□□ -0.1
Lire1P11260 Gm44454-201ENSMUST00000198541 138 ntBASIC14.4□□□□□ -0.1
Lire1P11260 Gm6376-201ENSMUST00000209407 580 ntBASIC14.4□□□□□ -0.1
Lire1P11260 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lire1P11260 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Lire1P11260 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lire1P11260 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Lire1P11260 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Lire1P11260 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lire1P11260 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Lire1P11260 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.39□□□□□ -0.11
Lire1P11260 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lire1P11260 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lire1P11260 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lire1P11260 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lire1P11260 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lire1P11260 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.39□□□□□ -0.11
Lire1P11260 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms