Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.71□□□□□ -0.37
Ly6c1P0CW02 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ly6c1P0CW02 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ly6c1P0CW02 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.71□□□□□ -0.38
Ly6c1P0CW02 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ly6c1P0CW02 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ly6c1P0CW02 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ly6c1P0CW02 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ly6c1P0CW02 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.71□□□□□ -0.38
Ly6c1P0CW02 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ly6c1P0CW02 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Gm4995-201ENSMUST00000117247 432 ntBASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Gm17968-201ENSMUST00000194902 784 ntBASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.69□□□□□ -0.38
Ly6c1P0CW02 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Sybu-209ENSMUST00000228639 4113 ntBASIC12.69□□□□□ -0.38
Ly6c1P0CW02 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms