Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
P04224 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
P04224 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.38□□□□□ -0.27
P04224 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.38□□□□□ -0.27
P04224 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
P04224 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.38□□□□□ -0.27
P04224 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.38□□□□□ -0.27
P04224 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.38□□□□□ -0.27
P04224 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.38□□□□□ -0.27
P04224 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
P04224 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
P04224 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04224 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P04224 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
P04224 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
P04224 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.37□□□□□ -0.27
P04224 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.37□□□□□ -0.27
P04224 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P04224 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
P04224 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.37□□□□□ -0.27
P04224 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
P04224 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
P04224 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04224 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P04224 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
P04224 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.36□□□□□ -0.27
P04224 Gm13436-201ENSMUST00000120418 567 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms