Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Hdac3O88895 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Hdac3O88895 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hdac3O88895 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Hdac3O88895 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.64□□□□□ -0.23
Hdac3O88895 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.64□□□□□ -0.23
Hdac3O88895 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.64□□□□□ -0.23
Hdac3O88895 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Hdac3O88895 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Gm25745-201ENSMUST00000174945 133 ntBASIC13.64□□□□□ -0.23
Hdac3O88895 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hdac3O88895 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.64□□□□□ -0.23
Hdac3O88895 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Hdac3O88895 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.64□□□□□ -0.23
Hdac3O88895 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Hdac3O88895 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hdac3O88895 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Hdac3O88895 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.63□□□□□ -0.23
Hdac3O88895 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.63□□□□□ -0.23
Hdac3O88895 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.63□□□□□ -0.23
Hdac3O88895 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hdac3O88895 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hdac3O88895 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdac3O88895 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.63□□□□□ -0.23
Hdac3O88895 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hdac3O88895 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.62□□□□□ -0.23
Hdac3O88895 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hdac3O88895 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Hdac3O88895 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.62□□□□□ -0.23
Hdac3O88895 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.62□□□□□ -0.23
Hdac3O88895 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.62□□□□□ -0.23
Hdac3O88895 Gm8655-201ENSMUST00000221159 852 ntBASIC13.62□□□□□ -0.23
Hdac3O88895 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hdac3O88895 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hdac3O88895 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hdac3O88895 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.62□□□□□ -0.23
Hdac3O88895 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.62□□□□□ -0.23
Hdac3O88895 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hdac3O88895 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.62□□□□□ -0.23
Hdac3O88895 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdac3O88895 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms