Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmx1bO88609 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmx1bO88609 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmx1bO88609 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Lmx1bO88609 Asic1-205ENSMUST00000228185 1818 ntBASIC13.8□□□□□ -0.2
Lmx1bO88609 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lmx1bO88609 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmx1bO88609 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lmx1bO88609 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.8□□□□□ -0.2
Lmx1bO88609 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmx1bO88609 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmx1bO88609 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lmx1bO88609 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.79□□□□□ -0.2
Lmx1bO88609 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lmx1bO88609 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lmx1bO88609 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.79□□□□□ -0.2
Lmx1bO88609 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Lmx1bO88609 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.79□□□□□ -0.2
Lmx1bO88609 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lmx1bO88609 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
Lmx1bO88609 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lmx1bO88609 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lmx1bO88609 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.78□□□□□ -0.2
Lmx1bO88609 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Lmx1bO88609 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.78□□□□□ -0.2
Lmx1bO88609 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
Lmx1bO88609 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.78□□□□□ -0.2
Lmx1bO88609 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.78□□□□□ -0.2
Lmx1bO88609 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Lmx1bO88609 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lmx1bO88609 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Lmx1bO88609 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.77□□□□□ -0.2
Lmx1bO88609 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Lmx1bO88609 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lmx1bO88609 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lmx1bO88609 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lmx1bO88609 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lmx1bO88609 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lmx1bO88609 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lmx1bO88609 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.77□□□□□ -0.21
Lmx1bO88609 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.77□□□□□ -0.21
Lmx1bO88609 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.77□□□□□ -0.21
Lmx1bO88609 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Gm17968-201ENSMUST00000194902 784 ntBASIC13.77□□□□□ -0.21
Lmx1bO88609 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lmx1bO88609 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.77□□□□□ -0.21
Lmx1bO88609 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lmx1bO88609 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lmx1bO88609 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms