Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ttc3O88196 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ttc3O88196 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ttc3O88196 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.85■□□□□ 0.13
Ttc3O88196 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.85■□□□□ 0.13
Ttc3O88196 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ttc3O88196 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ttc3O88196 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ttc3O88196 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ttc3O88196 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.84■□□□□ 0.13
Ttc3O88196 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.84■□□□□ 0.13
Ttc3O88196 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ttc3O88196 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.84■□□□□ 0.13
Ttc3O88196 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.84■□□□□ 0.13
Ttc3O88196 Gm15483-201ENSMUST00000120338 456 ntBASIC15.84■□□□□ 0.13
Ttc3O88196 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.84■□□□□ 0.13
Ttc3O88196 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ttc3O88196 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Gm22175-201ENSMUST00000175007 78 ntBASIC15.84■□□□□ 0.13
Ttc3O88196 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.84■□□□□ 0.13
Ttc3O88196 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ttc3O88196 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ttc3O88196 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ttc3O88196 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ttc3O88196 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.83■□□□□ 0.12
Ttc3O88196 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.83■□□□□ 0.12
Ttc3O88196 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.83■□□□□ 0.12
Ttc3O88196 Gm2451-201ENSMUST00000199447 999 ntBASIC15.83■□□□□ 0.12
Ttc3O88196 Gm10290-201ENSMUST00000200451 999 ntBASIC15.83■□□□□ 0.12
Ttc3O88196 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.83■□□□□ 0.12
Ttc3O88196 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ttc3O88196 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.83■□□□□ 0.12
Ttc3O88196 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ttc3O88196 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ttc3O88196 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ttc3O88196 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ttc3O88196 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Ttc3O88196 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ttc3O88196 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ttc3O88196 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Ttc3O88196 Gm17837-201ENSMUST00000186435 985 ntBASIC15.82■□□□□ 0.12
Ttc3O88196 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ttc3O88196 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ttc3O88196 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ttc3O88196 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms