Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Gm12895-201ENSMUST00000122214 226 ntBASIC15.14■□□□□ 0.01
Pknox1O70477 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.14■□□□□ 0.01
Pknox1O70477 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.14■□□□□ 0.01
Pknox1O70477 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.14■□□□□ 0.01
Pknox1O70477 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.14■□□□□ 0.01
Pknox1O70477 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.14■□□□□ 0.01
Pknox1O70477 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.14■□□□□ 0.01
Pknox1O70477 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.14■□□□□ 0.01
Pknox1O70477 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.14■□□□□ 0.01
Pknox1O70477 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Pknox1O70477 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pknox1O70477 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Pknox1O70477 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pknox1O70477 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Pknox1O70477 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pknox1O70477 Gm14859-201ENSMUST00000117752 357 ntBASIC15.13■□□□□ 0.01
Pknox1O70477 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.13■□□□□ 0.01
Pknox1O70477 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.13■□□□□ 0.01
Pknox1O70477 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pknox1O70477 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pknox1O70477 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pknox1O70477 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pknox1O70477 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pknox1O70477 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.12■□□□□ 0.01
Pknox1O70477 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pknox1O70477 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pknox1O70477 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pknox1O70477 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.12■□□□□ 0.01
Pknox1O70477 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.12■□□□□ 0.01
Pknox1O70477 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pknox1O70477 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pknox1O70477 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pknox1O70477 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pknox1O70477 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pknox1O70477 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pknox1O70477 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms