Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap1O54991 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap1O54991 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap1O54991 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.35■□□□□ 0.69
Cntnap1O54991 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap1O54991 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cntnap1O54991 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 Gm15808-201ENSMUST00000119046 604 ntBASIC19.34■□□□□ 0.69
Cntnap1O54991 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 Gm43068-201ENSMUST00000201095 1273 ntBASIC19.34■□□□□ 0.69
Cntnap1O54991 Gm7287-201ENSMUST00000205267 602 ntBASIC19.34■□□□□ 0.69
Cntnap1O54991 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cntnap1O54991 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 AL645783.1-201ENSMUST00000221416 1832 ntBASIC19.34■□□□□ 0.69
Cntnap1O54991 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.34■□□□□ 0.69
Cntnap1O54991 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cntnap1O54991 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cntnap1O54991 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cntnap1O54991 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cntnap1O54991 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Cntnap1O54991 Gm6916-202ENSMUST00000205523 195 ntBASIC19.33■□□□□ 0.69
Cntnap1O54991 Gm45098-201ENSMUST00000207179 657 ntBASIC19.33■□□□□ 0.69
Cntnap1O54991 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC19.33■□□□□ 0.69
Cntnap1O54991 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC19.33■□□□□ 0.69
Cntnap1O54991 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC19.33■□□□□ 0.69
Cntnap1O54991 Gm9823-201ENSMUST00000051212 327 ntBASIC19.33■□□□□ 0.69
Cntnap1O54991 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cntnap1O54991 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cntnap1O54991 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.33■□□□□ 0.69
Cntnap1O54991 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cntnap1O54991 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cntnap1O54991 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cntnap1O54991 Gm5763-201ENSMUST00000155951 1530 ntBASIC19.33■□□□□ 0.68
Cntnap1O54991 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cntnap1O54991 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Gm15393-201ENSMUST00000120499 219 ntBASIC19.32■□□□□ 0.68
Cntnap1O54991 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC19.32■□□□□ 0.68
Cntnap1O54991 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC19.32■□□□□ 0.68
Cntnap1O54991 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Gm7783-201ENSMUST00000204795 781 ntBASIC19.32■□□□□ 0.68
Cntnap1O54991 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cntnap1O54991 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cntnap1O54991 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.32■□□□□ 0.68
Cntnap1O54991 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cntnap1O54991 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Cntnap1O54991 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
Cntnap1O54991 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.32■□□□□ 0.68
Cntnap1O54991 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC19.32■□□□□ 0.68
Cntnap1O54991 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC19.32■□□□□ 0.68
Cntnap1O54991 AC093022.1-201ENSMUST00000226949 1072 ntBASIC19.32■□□□□ 0.68
Cntnap1O54991 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap1O54991 Gm3695-201ENSMUST00000087222 1009 ntBASIC19.32■□□□□ 0.68
Cntnap1O54991 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.31■□□□□ 0.68
Cntnap1O54991 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.31■□□□□ 0.68
Cntnap1O54991 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC19.31■□□□□ 0.68
Cntnap1O54991 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cntnap1O54991 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC19.31■□□□□ 0.68
Cntnap1O54991 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC19.31■□□□□ 0.68
Cntnap1O54991 AC125117.1-201ENSMUST00000228121 468 ntBASIC19.31■□□□□ 0.68
Cntnap1O54991 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Cntnap1O54991 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap1O54991 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cntnap1O54991 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC19.3■□□□□ 0.68
Cntnap1O54991 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap1O54991 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap1O54991 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap1O54991 Gm8775-201ENSMUST00000170943 1327 ntBASIC19.3■□□□□ 0.68
Cntnap1O54991 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap1O54991 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Cntnap1O54991 Gm42442-201ENSMUST00000197951 1133 ntBASIC19.3■□□□□ 0.68
Cntnap1O54991 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap1O54991 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap1O54991 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap1O54991 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms