Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
Smarce1O54941 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Gm13836-201ENSMUST00000121159 501 ntBASIC18.1■□□□□ 0.49
Smarce1O54941 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.1■□□□□ 0.49
Smarce1O54941 Gm7506-201ENSMUST00000207758 815 ntBASIC18.1■□□□□ 0.49
Smarce1O54941 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smarce1O54941 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smarce1O54941 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smarce1O54941 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Smarce1O54941 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Smarce1O54941 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Smarce1O54941 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.09■□□□□ 0.49
Smarce1O54941 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Smarce1O54941 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.09■□□□□ 0.49
Smarce1O54941 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarce1O54941 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smarce1O54941 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
Smarce1O54941 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Smarce1O54941 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.08■□□□□ 0.49
Smarce1O54941 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.08■□□□□ 0.49
Smarce1O54941 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Smarce1O54941 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smarce1O54941 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smarce1O54941 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Smarce1O54941 Gm15358-201ENSMUST00000119249 520 ntBASIC18.08■□□□□ 0.48
Smarce1O54941 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smarce1O54941 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.08■□□□□ 0.48
Smarce1O54941 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Smarce1O54941 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.08■□□□□ 0.48
Smarce1O54941 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.08■□□□□ 0.48
Smarce1O54941 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarce1O54941 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smarce1O54941 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smarce1O54941 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smarce1O54941 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarce1O54941 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarce1O54941 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.08■□□□□ 0.48
Smarce1O54941 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.08■□□□□ 0.48
Smarce1O54941 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarce1O54941 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarce1O54941 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smarce1O54941 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Smarce1O54941 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.07■□□□□ 0.48
Smarce1O54941 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Efs-202ENSMUST00000227037 2540 ntBASIC18.07■□□□□ 0.48
Smarce1O54941 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.07■□□□□ 0.48
Smarce1O54941 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Smarce1O54941 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.07■□□□□ 0.48
Smarce1O54941 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Smarce1O54941 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC18.07■□□□□ 0.48
Smarce1O54941 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarce1O54941 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Gm8318-201ENSMUST00000182954 872 ntBASIC18.06■□□□□ 0.48
Smarce1O54941 Gm27357-201ENSMUST00000183754 135 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms