Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.59□□□□□ -0.23
Dkk1O54908 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Dkk1O54908 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Dkk1O54908 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Dkk1O54908 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Dkk1O54908 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.59□□□□□ -0.23
Dkk1O54908 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Dkk1O54908 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Gm20574-201ENSMUST00000182867 917 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Gm27459-201ENSMUST00000184860 107 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Gm29036-201ENSMUST00000189967 877 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC13.59□□□□□ -0.23
Dkk1O54908 Gm7688-201ENSMUST00000212857 337 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Dkk1O54908 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC13.59□□□□□ -0.23
Dkk1O54908 AC123735.1-201ENSMUST00000227358 605 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Dkk1O54908 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Dkk1O54908 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.59□□□□□ -0.23
Dkk1O54908 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Dkk1O54908 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Dkk1O54908 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Dkk1O54908 Phf7-206ENSMUST00000228437 1373 ntBASIC13.58□□□□□ -0.23
Dkk1O54908 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Dkk1O54908 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm4459-201ENSMUST00000118750 468 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm21139-201ENSMUST00000186594 877 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 Gm3116-201ENSMUST00000189440 1116 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 Gm42612-201ENSMUST00000197986 623 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 Gm42796-201ENSMUST00000199913 1087 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC13.58□□□□□ -0.24
Dkk1O54908 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 Gm19169-201ENSMUST00000220109 1246 ntBASIC13.58□□□□□ -0.24
Dkk1O54908 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Dkk1O54908 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms