Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC16.52■□□□□ 0.24
Clcn6O35454 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Clcn6O35454 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Clcn6O35454 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Gm19174-201ENSMUST00000216944 956 ntBASIC16.52■□□□□ 0.24
Clcn6O35454 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Clcn6O35454 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn6O35454 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn6O35454 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn6O35454 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn6O35454 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Clcn6O35454 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn6O35454 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Clcn6O35454 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn6O35454 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Clcn6O35454 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.51■□□□□ 0.23
Clcn6O35454 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.51■□□□□ 0.23
Clcn6O35454 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.51■□□□□ 0.23
Clcn6O35454 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC16.51■□□□□ 0.23
Clcn6O35454 Gm26039-201ENSMUST00000158152 144 ntBASIC16.51■□□□□ 0.23
Clcn6O35454 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC16.51■□□□□ 0.23
Clcn6O35454 Gm43058-201ENSMUST00000197645 625 ntBASIC16.51■□□□□ 0.23
Clcn6O35454 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.51■□□□□ 0.23
Clcn6O35454 Gm7439-201ENSMUST00000214053 835 ntBASIC16.51■□□□□ 0.23
Clcn6O35454 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.51■□□□□ 0.23
Clcn6O35454 Gm18115-201ENSMUST00000221209 621 ntBASIC16.51■□□□□ 0.23
Clcn6O35454 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.51■□□□□ 0.23
Clcn6O35454 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn6O35454 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Clcn6O35454 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Clcn6O35454 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Clcn6O35454 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.5■□□□□ 0.23
Clcn6O35454 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Gm22697-201ENSMUST00000175194 63 ntBASIC16.5■□□□□ 0.23
Clcn6O35454 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC16.5■□□□□ 0.23
Clcn6O35454 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC16.5■□□□□ 0.23
Clcn6O35454 Gm8869-201ENSMUST00000195222 947 ntBASIC16.5■□□□□ 0.23
Clcn6O35454 Gm5708-201ENSMUST00000196289 886 ntBASIC16.5■□□□□ 0.23
Clcn6O35454 Gm44450-201ENSMUST00000199528 114 ntBASIC16.5■□□□□ 0.23
Clcn6O35454 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.5■□□□□ 0.23
Clcn6O35454 Gm18101-201ENSMUST00000215769 548 ntBASIC16.5■□□□□ 0.23
Clcn6O35454 AC153544.1-201ENSMUST00000217988 400 ntBASIC16.5■□□□□ 0.23
Clcn6O35454 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC16.5■□□□□ 0.23
Clcn6O35454 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Clcn6O35454 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.5■□□□□ 0.23
Clcn6O35454 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn6O35454 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn6O35454 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn6O35454 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn6O35454 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms