Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.31□□□□□ -0.12
Cx3cl1O35188 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.31□□□□□ -0.12
Cx3cl1O35188 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gm9682-201ENSMUST00000197505 556 ntBASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gm45167-201ENSMUST00000208007 322 ntBASIC14.31□□□□□ -0.12
Cx3cl1O35188 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.31□□□□□ -0.12
Cx3cl1O35188 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.31□□□□□ -0.12
Cx3cl1O35188 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.31□□□□□ -0.12
Cx3cl1O35188 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Gm6443-201ENSMUST00000203599 874 ntBASIC14.3□□□□□ -0.12
Cx3cl1O35188 Gm7787-201ENSMUST00000216858 688 ntBASIC14.3□□□□□ -0.12
Cx3cl1O35188 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cl1O35188 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Gm8318-201ENSMUST00000182954 872 ntBASIC14.29□□□□□ -0.12
Cx3cl1O35188 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.29□□□□□ -0.12
Cx3cl1O35188 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.29□□□□□ -0.12
Cx3cl1O35188 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.29□□□□□ -0.12
Cx3cl1O35188 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms