Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.57■□□□□ 0.08
Ercc2O08811 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc2O08811 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ercc2O08811 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Ercc2O08811 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc2O08811 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc2O08811 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc2O08811 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.56■□□□□ 0.08
Ercc2O08811 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.56■□□□□ 0.08
Ercc2O08811 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.56■□□□□ 0.08
Ercc2O08811 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.56■□□□□ 0.08
Ercc2O08811 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ercc2O08811 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc2O08811 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.55■□□□□ 0.08
Ercc2O08811 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ercc2O08811 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ercc2O08811 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc2O08811 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.55■□□□□ 0.08
Ercc2O08811 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ercc2O08811 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ercc2O08811 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Ercc2O08811 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.54■□□□□ 0.08
Ercc2O08811 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.54■□□□□ 0.08
Ercc2O08811 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.54■□□□□ 0.08
Ercc2O08811 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Celf4-206ENSMUST00000224553 1729 ntBASIC15.54■□□□□ 0.08
Ercc2O08811 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ercc2O08811 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc2O08811 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms