Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Dctn1O08788 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dctn1O08788 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.71■□□□□ 0.59
Dctn1O08788 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dctn1O08788 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dctn1O08788 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Dctn1O08788 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Dctn1O08788 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dctn1O08788 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dctn1O08788 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dctn1O08788 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.7■□□□□ 0.58
Dctn1O08788 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.7■□□□□ 0.58
Dctn1O08788 Gm11543-201ENSMUST00000120758 370 ntBASIC18.7■□□□□ 0.58
Dctn1O08788 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.7■□□□□ 0.58
Dctn1O08788 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
Dctn1O08788 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.7■□□□□ 0.58
Dctn1O08788 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dctn1O08788 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
Dctn1O08788 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.69■□□□□ 0.58
Dctn1O08788 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Dctn1O08788 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Dctn1O08788 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.69■□□□□ 0.58
Dctn1O08788 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Dctn1O08788 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Dctn1O08788 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dctn1O08788 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.68■□□□□ 0.58
Dctn1O08788 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Dctn1O08788 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 Mir6977-201ENSMUST00000184960 64 ntBASIC18.68■□□□□ 0.58
Dctn1O08788 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.68■□□□□ 0.58
Dctn1O08788 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.68■□□□□ 0.58
Dctn1O08788 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.68■□□□□ 0.58
Dctn1O08788 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Dctn1O08788 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dctn1O08788 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
Dctn1O08788 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.67■□□□□ 0.58
Dctn1O08788 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Dctn1O08788 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Dctn1O08788 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Dctn1O08788 Gm17837-201ENSMUST00000186435 985 ntBASIC18.67■□□□□ 0.58
Dctn1O08788 Gm38225-201ENSMUST00000194001 393 ntBASIC18.67■□□□□ 0.58
Dctn1O08788 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.67■□□□□ 0.58
Dctn1O08788 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.67■□□□□ 0.58
Dctn1O08788 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.67■□□□□ 0.58
Dctn1O08788 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Dctn1O08788 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dctn1O08788 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dctn1O08788 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dctn1O08788 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dctn1O08788 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.66■□□□□ 0.58
Dctn1O08788 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms