Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3139J3QK78 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Gm27702-201ENSMUST00000184512 56 ntBASIC15.13■□□□□ 0.01
Gm3139J3QK78 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Gm5867-201ENSMUST00000063197 592 ntBASIC15.13■□□□□ 0.01
Gm3139J3QK78 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.13■□□□□ 0.01
Gm3139J3QK78 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3139J3QK78 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.12■□□□□ 0.01
Gm3139J3QK78 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.12■□□□□ 0.01
Gm3139J3QK78 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3139J3QK78 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Gm3139J3QK78 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Gm15427-201ENSMUST00000117288 531 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 Gm10154-201ENSMUST00000084445 354 ntBASIC15.11■□□□□ 0.01
Gm3139J3QK78 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3139J3QK78 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms