Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.11■□□□□ 0.17
Gm17535J3KMR8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm17535J3KMR8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17535J3KMR8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm17535J3KMR8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms