Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Gm17150-201ENSMUST00000165577 381 ntBASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Gm28760-201ENSMUST00000185995 736 ntBASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Gm9797-201ENSMUST00000052902 613 ntBASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Tcf21-202ENSMUST00000218002 1788 ntBASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Gm31326-201ENSMUST00000191856 1048 ntBASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Gm42473-201ENSMUST00000201056 2291 ntBASIC21.09■□□□□ 0.97
Hfm1D3Z4R1 Gm8131-201ENSMUST00000213783 1570 ntBASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hfm1D3Z4R1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hfm1D3Z4R1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Hfm1D3Z4R1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hfm1D3Z4R1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC21.08■□□□□ 0.96
Hfm1D3Z4R1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hfm1D3Z4R1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Hfm1D3Z4R1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
Hfm1D3Z4R1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Gm11918-201ENSMUST00000121660 179 ntBASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Mir1938-201ENSMUST00000158746 100 ntBASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hfm1D3Z4R1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hfm1D3Z4R1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Gm43630-201ENSMUST00000201550 776 ntBASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms