Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gm7488-201ENSMUST00000117148 684 ntBASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gm14127-201ENSMUST00000117906 678 ntBASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gm8318-201ENSMUST00000182954 872 ntBASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gm27680-201ENSMUST00000184192 160 ntBASIC13.63□□□□□ -0.23
Shank1D3YZU1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.62□□□□□ -0.23
Shank1D3YZU1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Gm6415-201ENSMUST00000118488 348 ntBASIC13.62□□□□□ -0.23
Shank1D3YZU1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Mir8102-201ENSMUST00000184148 139 ntBASIC13.62□□□□□ -0.23
Shank1D3YZU1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.62□□□□□ -0.23
Shank1D3YZU1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shank1D3YZU1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Gm6912-201ENSMUST00000117218 544 ntBASIC13.61□□□□□ -0.23
Shank1D3YZU1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.61□□□□□ -0.23
Shank1D3YZU1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Gm13453-201ENSMUST00000118708 357 ntBASIC13.61□□□□□ -0.23
Shank1D3YZU1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.61□□□□□ -0.23
Shank1D3YZU1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shank1D3YZU1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.6□□□□□ -0.23
Shank1D3YZU1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Shank1D3YZU1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shank1D3YZU1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shank1D3YZU1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Shank1D3YZU1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shank1D3YZU1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms