Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Gm26308-201ENSMUST00000157768 69 ntBASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.53■□□□□ 0.88
Tmf1B9EKI3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tmf1B9EKI3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Gm10154-201ENSMUST00000084445 354 ntBASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmf1B9EKI3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tmf1B9EKI3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tmf1B9EKI3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tmf1B9EKI3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Gm9385-201ENSMUST00000117563 472 ntBASIC20.51■□□□□ 0.87
Tmf1B9EKI3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmf1B9EKI3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Gm15920-201ENSMUST00000118998 402 ntBASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmf1B9EKI3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmf1B9EKI3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms