Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.43■□□□□ 0.38
Syce3B5KM66 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Syce3B5KM66 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.43■□□□□ 0.38
Syce3B5KM66 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Gm45058-201ENSMUST00000205810 766 ntBASIC17.43■□□□□ 0.38
Syce3B5KM66 Gm21559-201ENSMUST00000220638 855 ntBASIC17.43■□□□□ 0.38
Syce3B5KM66 Gm8587-201ENSMUST00000076538 843 ntBASIC17.43■□□□□ 0.38
Syce3B5KM66 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Syce3B5KM66 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Syce3B5KM66 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Syce3B5KM66 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Syce3B5KM66 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Syce3B5KM66 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.42■□□□□ 0.38
Syce3B5KM66 Gm27389-201ENSMUST00000183622 195 ntBASIC17.42■□□□□ 0.38
Syce3B5KM66 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syce3B5KM66 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Syce3B5KM66 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Syce3B5KM66 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Syce3B5KM66 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.41■□□□□ 0.38
Syce3B5KM66 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Syce3B5KM66 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Gm7889-201ENSMUST00000185591 958 ntBASIC17.41■□□□□ 0.38
Syce3B5KM66 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Gm10812-201ENSMUST00000099864 546 ntBASIC17.41■□□□□ 0.38
Syce3B5KM66 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.41■□□□□ 0.38
Syce3B5KM66 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Syce3B5KM66 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syce3B5KM66 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Syce3B5KM66 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.4■□□□□ 0.38
Syce3B5KM66 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.4■□□□□ 0.38
Syce3B5KM66 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.4■□□□□ 0.38
Syce3B5KM66 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.4■□□□□ 0.38
Syce3B5KM66 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.4■□□□□ 0.38
Syce3B5KM66 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syce3B5KM66 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.39■□□□□ 0.38
Syce3B5KM66 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Syce3B5KM66 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syce3B5KM66 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.39■□□□□ 0.37
Syce3B5KM66 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syce3B5KM66 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syce3B5KM66 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms