Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.86□□□□□ -0.03
Chd3B1AR17 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.86□□□□□ -0.03
Chd3B1AR17 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.86□□□□□ -0.03
Chd3B1AR17 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.86□□□□□ -0.03
Chd3B1AR17 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.86□□□□□ -0.03
Chd3B1AR17 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.86□□□□□ -0.03
Chd3B1AR17 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.86□□□□□ -0.03
Chd3B1AR17 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.86□□□□□ -0.03
Chd3B1AR17 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd3B1AR17 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Chd3B1AR17 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Chd3B1AR17 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.85□□□□□ -0.03
Chd3B1AR17 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Mir1895-201ENSMUST00000122615 79 ntBASIC14.85□□□□□ -0.03
Chd3B1AR17 Gm17271-201ENSMUST00000165535 355 ntBASIC14.85□□□□□ -0.03
Chd3B1AR17 Mir6956-201ENSMUST00000183598 62 ntBASIC14.85□□□□□ -0.03
Chd3B1AR17 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chd3B1AR17 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Chd3B1AR17 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.85□□□□□ -0.03
Chd3B1AR17 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.85□□□□□ -0.03
Chd3B1AR17 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.85□□□□□ -0.03
Chd3B1AR17 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Gm6973-201ENSMUST00000117080 721 ntBASIC14.85□□□□□ -0.03
Chd3B1AR17 Gm13365-201ENSMUST00000121188 973 ntBASIC14.85□□□□□ -0.03
Chd3B1AR17 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.85□□□□□ -0.03
Chd3B1AR17 Gm27920-201ENSMUST00000183953 96 ntBASIC14.85□□□□□ -0.03
Chd3B1AR17 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.85□□□□□ -0.03
Chd3B1AR17 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd3B1AR17 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chd3B1AR17 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.84□□□□□ -0.03
Chd3B1AR17 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.84□□□□□ -0.03
Chd3B1AR17 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Gm2810-201ENSMUST00000118681 990 ntBASIC14.84□□□□□ -0.03
Chd3B1AR17 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Chd3B1AR17 Gm26308-201ENSMUST00000157768 69 ntBASIC14.84□□□□□ -0.03
Chd3B1AR17 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.84□□□□□ -0.03
Chd3B1AR17 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chd3B1AR17 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chd3B1AR17 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chd3B1AR17 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.84□□□□□ -0.03
Chd3B1AR17 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd3B1AR17 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.84□□□□□ -0.03
Chd3B1AR17 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Chd3B1AR17 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chd3B1AR17 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms