Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3aA2ASI5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm12428-201ENSMUST00000119844 727 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm29310-201ENSMUST00000185468 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21825-201ENSMUST00000185728 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm29109-201ENSMUST00000185895 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21896-201ENSMUST00000186520 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21873-201ENSMUST00000186728 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21794-201ENSMUST00000187056 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21880-201ENSMUST00000187275 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21826-201ENSMUST00000187451 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21198-201ENSMUST00000188393 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21749-201ENSMUST00000189343 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21901-201ENSMUST00000189568 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm29424-201ENSMUST00000189716 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm28599-201ENSMUST00000189838 694 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21867-201ENSMUST00000189917 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm29269-201ENSMUST00000190087 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21722-201ENSMUST00000190153 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm28423-201ENSMUST00000190701 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21899-201ENSMUST00000190745 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21910-201ENSMUST00000191163 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21849-201ENSMUST00000191571 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm28678-201ENSMUST00000191593 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm20910-201ENSMUST00000193268 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Gm21871-201ENSMUST00000194621 696 ntBASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3aA2ASI5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn3aA2ASI5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Scn3aA2ASI5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Scn3aA2ASI5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm13464-201ENSMUST00000119418 935 ntBASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm27430-201ENSMUST00000184585 107 ntBASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm44333-201ENSMUST00000197168 107 ntBASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm18049-201ENSMUST00000208909 581 ntBASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Scn3aA2ASI5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms