Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-1A0N8R0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Mir3081-201ENSMUST00000175305 84 ntBASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-1A0N8R0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Gm25016-201ENSMUST00000158399 131 ntBASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Gm17808-201ENSMUST00000200859 894 ntBASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms