Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
1700028J19RikA0A0U1RP08 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
1700028J19RikA0A0U1RP08 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
1700028J19RikA0A0U1RP08 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.31□□□□□ -0.12
1700028J19RikA0A0U1RP08 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
1700028J19RikA0A0U1RP08 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
1700028J19RikA0A0U1RP08 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
1700028J19RikA0A0U1RP08 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.3□□□□□ -0.12
1700028J19RikA0A0U1RP08 Celf4-206ENSMUST00000224553 1729 ntBASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm13418-201ENSMUST00000119097 944 ntBASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
1700028J19RikA0A0U1RP08 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44357-201ENSMUST00000195897 142 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm19658-201ENSMUST00000196231 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44367-201ENSMUST00000196836 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44350-201ENSMUST00000197197 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44390-201ENSMUST00000197533 144 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm6089-201ENSMUST00000197666 938 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44313-201ENSMUST00000198018 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44486-201ENSMUST00000198508 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44314-201ENSMUST00000199263 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44394-201ENSMUST00000199558 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44484-201ENSMUST00000199873 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44466-201ENSMUST00000200264 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Gm44359-201ENSMUST00000200671 138 ntBASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
1700028J19RikA0A0U1RP08 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms