Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv29A0A0G2LB96 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv29A0A0G2LB96 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv29A0A0G2LB96 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Gm18622-201ENSMUST00000219361 595 ntBASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv29A0A0G2LB96 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms