Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Gm4459-201ENSMUST00000118750 468 ntBASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Gm19164-201ENSMUST00000210667 640 ntBASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9-1A0A075B601 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9-1A0A075B601 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9-1A0A075B601 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9-1A0A075B601 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trav9-1A0A075B601 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9-1A0A075B601 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms