Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb2S4R1M3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb2S4R1M3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Gm7222-201ENSMUST00000117512 906 ntBASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Gm11452-201ENSMUST00000122376 690 ntBASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Gm18489-201ENSMUST00000172565 551 ntBASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
H2afb2S4R1M3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Gm7862-201ENSMUST00000121461 292 ntBASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms