Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hmg20bQ9Z104 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmg20bQ9Z104 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmg20bQ9Z104 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmg20bQ9Z104 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Gm18195-201ENSMUST00000207604 706 ntBASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Gm45167-201ENSMUST00000208007 322 ntBASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20bQ9Z104 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20bQ9Z104 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Gm13036-201ENSMUST00000117799 748 ntBASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20bQ9Z104 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.92■□□□□ 0.46
Hmg20bQ9Z104 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms