Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx9Q9WUH2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Gm44492-201ENSMUST00000197012 141 ntBASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Chchd1-203ENSMUST00000224633 557 ntBASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx9Q9WUH2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.46□□□□□ -0.09
Lhx9Q9WUH2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Lhx9Q9WUH2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx9Q9WUH2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.46□□□□□ -0.1
Lhx9Q9WUH2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Lhx9Q9WUH2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx9Q9WUH2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx9Q9WUH2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx9Q9WUH2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.46□□□□□ -0.1
Lhx9Q9WUH2 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx9Q9WUH2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms