Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm4535-201ENSMUST00000182274 558 ntBASIC13.54□□□□□ -0.24
Nubp2Q9R061 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Gm10355-201ENSMUST00000097146 517 ntBASIC13.54□□□□□ -0.24
Nubp2Q9R061 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp2Q9R061 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Gm43514-201ENSMUST00000198852 424 ntBASIC13.53□□□□□ -0.24
Nubp2Q9R061 Gm2651-201ENSMUST00000203560 838 ntBASIC13.53□□□□□ -0.24
Nubp2Q9R061 Gm10060-201ENSMUST00000212002 111 ntBASIC13.53□□□□□ -0.24
Nubp2Q9R061 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp2Q9R061 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nubp2Q9R061 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nubp2Q9R061 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nubp2Q9R061 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Nubp2Q9R061 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nubp2Q9R061 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Nubp2Q9R061 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nubp2Q9R061 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nubp2Q9R061 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.52□□□□□ -0.25
Nubp2Q9R061 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp2Q9R061 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.51□□□□□ -0.25
Nubp2Q9R061 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp2Q9R061 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms