Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Gm44454-201ENSMUST00000198541 138 ntBASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Gm18669-201ENSMUST00000216049 778 ntBASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh5Q9QUM7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Msh5Q9QUM7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Gm9103-201ENSMUST00000119371 405 ntBASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Gm12895-201ENSMUST00000122214 226 ntBASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Gm19540-201ENSMUST00000221843 810 ntBASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh5Q9QUM7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Msh5Q9QUM7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms