Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Gm23547-201ENSMUST00000158210 271 ntBASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smco4Q9JIS3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Smco4Q9JIS3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smco4Q9JIS3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smco4Q9JIS3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smco4Q9JIS3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smco4Q9JIS3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Smco4Q9JIS3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smco4Q9JIS3 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smco4Q9JIS3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco4Q9JIS3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms