Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Gm25745-201ENSMUST00000174945 133 ntBASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl28Q9JIL2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl28Q9JIL2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl28Q9JIL2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Ccl28Q9JIL2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Ccl28Q9JIL2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Gm14859-201ENSMUST00000117752 357 ntBASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Gm15165-201ENSMUST00000118140 502 ntBASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Gm27867-201ENSMUST00000184778 125 ntBASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccl28Q9JIL2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms