Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube3bQ9ES34 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Asic1-205ENSMUST00000228185 1818 ntBASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube3bQ9ES34 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube3bQ9ES34 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Gm26308-201ENSMUST00000157768 69 ntBASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ube3bQ9ES34 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ube3bQ9ES34 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ube3bQ9ES34 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube3bQ9ES34 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube3bQ9ES34 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms