Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm8097-201ENSMUST00000117903 829 ntBASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm4535-201ENSMUST00000182274 558 ntBASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gm10355-201ENSMUST00000097146 517 ntBASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a3bpQ9EQG9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.46■□□□□ 0.38
Col4a3bpQ9EQG9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.46■□□□□ 0.38
Col4a3bpQ9EQG9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Gm18733-201ENSMUST00000173950 856 ntBASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a3bpQ9EQG9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Gm13418-201ENSMUST00000119097 944 ntBASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Gm15358-201ENSMUST00000119249 520 ntBASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a3bpQ9EQG9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a3bpQ9EQG9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a3bpQ9EQG9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms