Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp5Q9D7S9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp5Q9D7S9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Mir3081-201ENSMUST00000175305 84 ntBASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Gm19164-201ENSMUST00000210667 640 ntBASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp5Q9D7S9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Gm44454-201ENSMUST00000198541 138 ntBASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp5Q9D7S9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Rprl3-201ENSMUST00000157400 290 ntBASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Chmp5Q9D7S9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms