Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Gm13836-201ENSMUST00000121159 501 ntBASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Gm21559-201ENSMUST00000220638 855 ntBASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Gm8587-201ENSMUST00000076538 843 ntBASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Gm11355-201ENSMUST00000121120 306 ntBASIC14.11□□□□□ -0.15
Trim13Q9CYB0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim13Q9CYB0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Gm10231-201ENSMUST00000181584 441 ntBASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Gm10175-202ENSMUST00000208752 441 ntBASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim13Q9CYB0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim13Q9CYB0 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.09□□□□□ -0.15
Trim13Q9CYB0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms