Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otud1Q9CUB6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otud1Q9CUB6 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.38□□□□□ -0.11
Otud1Q9CUB6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.38□□□□□ -0.11
Otud1Q9CUB6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Gm43575-201ENSMUST00000196420 516 ntBASIC14.37□□□□□ -0.11
Otud1Q9CUB6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Otud1Q9CUB6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms