Protein–RNA interactions for Protein: Q9CQ82

Itgb3bp, Centromere protein R, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3bpQ9CQ82 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Gm25016-201ENSMUST00000158399 131 ntBASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Mir6404-201ENSMUST00000183699 94 ntBASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3bpQ9CQ82 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Gm45328-201ENSMUST00000210942 917 ntBASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3bpQ9CQ82 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3bpQ9CQ82 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Itgb3bpQ9CQ82 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3bpQ9CQ82 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms