Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.13■□□□□ 0.01
Trim33Q99PP7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Gm7230-201ENSMUST00000173026 815 ntBASIC15.13■□□□□ 0.01
Trim33Q99PP7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.13■□□□□ 0.01
Trim33Q99PP7 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.13■□□□□ 0.01
Trim33Q99PP7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim33Q99PP7 App-207ENSMUST00000227737 2827 ntBASIC15.13■□□□□ 0.01
Trim33Q99PP7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.13■□□□□ 0.01
Trim33Q99PP7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Gm15173-201ENSMUST00000122049 433 ntBASIC15.12■□□□□ 0.01
Trim33Q99PP7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim33Q99PP7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.11■□□□□ 0.01
Trim33Q99PP7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.11■□□□□ 0.01
Trim33Q99PP7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim33Q99PP7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms