Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gtf2ird2Q99NI3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Gtf2ird2Q99NI3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.68■□□□□ 0.1
Gtf2ird2Q99NI3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gtf2ird2Q99NI3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.68■□□□□ 0.1
Gtf2ird2Q99NI3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gtf2ird2Q99NI3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Mir8117-201ENSMUST00000184773 107 ntBASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.67■□□□□ 0.1
Gtf2ird2Q99NI3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gtf2ird2Q99NI3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gm14494-201ENSMUST00000118786 435 ntBASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gtf2ird2Q99NI3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms