Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga3Q91XY5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Gm18622-201ENSMUST00000219361 595 ntBASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhga3Q91XY5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms