Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx41Q91VN6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Gm4899-201ENSMUST00000178708 719 ntBASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx41Q91VN6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Gm6736-201ENSMUST00000166583 948 ntBASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Gm2756-201ENSMUST00000195851 400 ntBASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Gm43575-201ENSMUST00000196420 516 ntBASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Gm10175-201ENSMUST00000086013 645 ntBASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx41Q91VN6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms