Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Gm15321-201ENSMUST00000121290 288 ntBASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Gm18018-201ENSMUST00000198273 408 ntBASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Gm9063-201ENSMUST00000223299 582 ntBASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg4Q8VHY0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Gm27920-201ENSMUST00000183953 96 ntBASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.05□□□□□ -0.32
Cspg4Q8VHY0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cspg4Q8VHY0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms